4PH2
mature N-terminal domain of capsid protein from bovine leukemia virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-11-14 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.670, 56.040, 103.070 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.740 - 1.440 |
R-factor | 0.164 |
Rwork | 0.163 |
R-free | 0.18580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ph3 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.052 |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 51.530 | 1.540 | |
High resolution limit [Å] | 1.440 | 15.000 | 1.440 |
Rmerge | 0.057 | 0.028 | 0.225 |
Rmeas | 0.065 | 0.033 | 0.255 |
Total number of observations | 174086 | ||
Number of reflections | 40094 | 40 | 7138 |
<I/σ(I)> | 16.31 | 24.48 | 6.82 |
Completeness [%] | 92.2 | 72.7 | 91.7 |
Redundancy | 4.3 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 293 | 0.2M AmAc, 1M Ammonium sulphate |