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4PGP

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM DESULFOVIBRIO ALASKENSIS G20 (Dde_0634, TARGET EFI-510120) WITH BOUND 3-INDOLE ACETIC ACID

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-03-21
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths50.286, 145.536, 97.919
Unit cell angles90.00, 92.19, 90.00
Refinement procedure
Resolution35.742 - 2.250
R-factor0.2054
Rwork0.202
R-free0.26180
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.014
RMSD bond angle1.438
Data scaling softwareAimless (0.1.27)
Refinement softwarePHENIX ((phenix.refine: 1.8.1_1168))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.46043.4602.310
High resolution limit [Å]2.25010.3102.250
Rmerge0.1530.0431.030
Rpim0.0990.0280.675
Total number of observations190054181413031
Number of reflections61615
<I/σ(I)>3.37.81
Completeness [%]92.579.792
Redundancy3.13.23
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5298Protein (68.0 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM 3-INDOLE ACETIC ACID); Reservoir (0.2 M di-Ammonium Hydrogen Citrate pH 5.0, 20 %(w/v) PEG 3350); Cryoprotection (80% Reservoir + 20% Ethylene Glycol)

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PDB entries from 2024-05-15

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