4P7U
Extracellular domain of type II Transforming Growth Factor Beta receptor in complex with NDSB-201
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.574, 40.463, 75.837 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.439 - 1.502 |
R-factor | 0.174 |
Rwork | 0.171 |
R-free | 0.20580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1m9z |
RMSD bond length | 0.007 |
RMSD bond angle | 1.181 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 22.100 | 22.100 | 1.550 |
High resolution limit [Å] | 1.500 | 3.230 | 1.500 |
Rmerge | 0.054 | 0.041 | 0.419 |
Total number of observations | 104863 | ||
Number of reflections | 17064 | ||
<I/σ(I)> | 11.9 | ||
Completeness [%] | 99.5 | 99.9 | 98.5 |
Redundancy | 6.1 | 5.7 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 298 | 100 mM sodium citrate, 30% PEG 2000 |