4P1X
Crystal structure of staphylococcal LUK prepore
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-08 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.28253 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 193.310, 193.160, 116.380 |
Unit cell angles | 90.00, 118.94, 90.00 |
Refinement procedure
Resolution | 48.295 - 2.400 |
R-factor | 0.1826 |
Rwork | 0.182 |
R-free | 0.22290 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.363 |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.300 | 2.486 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.131 | 0.545 |
Number of reflections | 144820 | |
<I/σ(I)> | 7.14 | 2.48 |
Completeness [%] | 99.6 | 97.89 |
Redundancy | 3.8 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 293 | 40% MPD, 0.1M sodium acetate (pH 4.8), 0.15 M di-sodium hydrogen phosphate |