4OVX
Crystal structure of Xylose isomerase domain protein from Planctomyces limnophilus DSM 3776
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-02 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97915 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 88.305, 88.305, 132.907 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.855 - 2.253 |
R-factor | 0.2005 |
Rwork | 0.198 |
R-free | 0.24400 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.156 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | PHENIX ((phenix.refine: 1.8.3_1479)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.290 |
High resolution limit [Å] | 2.250 | 6.100 | 2.250 |
Rmerge | 0.098 | 0.042 | 0.996 |
Total number of observations | 296247 | ||
Number of reflections | 25577 | ||
<I/σ(I)> | 7 | ||
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 11.6 | 10.4 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.2 M Lithium Chloride, 20% PEG 3350 |