4OT8
X-ray Crystal Structure of Serine Hydroxymethyl Transferase from Burkholderia cenocepacia bound to PLP and Serine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-16 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.220, 179.840, 75.640 |
Unit cell angles | 90.00, 115.25, 90.00 |
Refinement procedure
Resolution | 42.370 - 2.000 |
R-factor | 0.1675 |
Rwork | 0.165 |
R-free | 0.20630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mso |
RMSD bond length | 0.005 |
RMSD bond angle | 1.000 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1659) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 89.920 | 2.050 | |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.091 | 0.033 | 0.637 |
Number of reflections | 98253 | ||
<I/σ(I)> | 8.29 | 24.29 | 1.71 |
Completeness [%] | 91.2 | 78.7 | 94.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | MCSG1 condition F2: 0.2 M ammonium acetate, 0.1 M BIS-TRIS pH 6.50, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 289K |