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4OFV

Refinement of RAGE-DNA complex in 3S58 without DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Detector technologyCCD
DetectorMARMOSAIC 300 mm CCD
Spacegroup nameP 61
Unit cell lengths77.920, 77.920, 224.387
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution43.140 - 3.100
R-factor0.221
Rwork0.220
R-free0.24000
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3S58
RMSD bond length0.002
RMSD bond angle0.673
Refinement softwarePHENIX (1.8.3_1479)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]3.100
Number of reflections13817
Completeness [%]99.0
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.429812% PEG6000, 0.1 M Tris-HCl, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-15

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