Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ODU

Unliganded Fab structure of lipid A-specific antibody S1-15

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2011-12-01
DetectorMARMOSAIC 300 mm CCD
Spacegroup nameP 1 21 1
Unit cell lengths75.787, 77.638, 71.958
Unit cell angles90.00, 96.83, 90.00
Refinement procedure
Resolution50.000 - 2.290
R-factor0.19
Rwork0.187
R-free0.23300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4odt
RMSD bond length0.010
RMSD bond angle1.418
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.1.4)
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.340
High resolution limit [Å]2.2902.290
Rmerge0.0630.615
Number of reflections37458
<I/σ(I)>11.4
Completeness [%]100.0100
Redundancy55.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1728925% (w/v) PEG 2000 MME, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon