4NW3
Crystal structure of MLL CXXC domain in complex with a CpG DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-04-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.28231 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 70.327, 40.225, 60.959 |
Unit cell angles | 90.00, 93.51, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.820 |
R-factor | 0.2206 |
Rwork | 0.218 |
R-free | 0.26640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 3QMB AND 3QMG |
RMSD bond length | 0.011 |
RMSD bond angle | 1.326 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 2.920 |
High resolution limit [Å] | 2.820 | 6.070 | 2.820 |
Rmerge | 0.066 | 0.039 | 0.951 |
Rmeas | 0.066 | ||
Total number of observations | 30008 | ||
Number of reflections | 4229 | ||
<I/σ(I)> | 12.2 | ||
Completeness [%] | 99.8 | 98 | 100 |
Redundancy | 3.7 | 3.7 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 20% PEG3350, 0.05 M sodium tartrate, VAPOR DIFFUSION, temperature 291K |