Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NJE

Crystal structure of Pyrococcus furiosus L-asparaginase with ligand

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR-H
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-10-05
DetectorMAR scanner 345 mm plate
Wavelength(s)1.54179
Spacegroup nameP 65 2 2
Unit cell lengths91.590, 91.590, 188.770
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution60.724 - 2.500
R-factor0.2305
Rwork0.228
R-free0.27010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4LX7
RMSD bond length0.009
RMSD bond angle1.234
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASES
Refinement softwarePHENIX ((phenix.refine: 1.7.2_869))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.7242.640
High resolution limit [Å]2.5002.500
Rmerge0.1330.711
Number of reflections16068
<I/σ(I)>13.53.9
Completeness [%]94.899.7
Redundancy13.413.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6293200mM Sodium citrate tribasic dihydrate, 100mM Sodium cacodylate, 30%(v/v) 2-Propanol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon