Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NH5

Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 14-mer siRNA having 5'-pUU and UU-3' ends (2.55 Angstrom resolution)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2010-04-12
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameC 1 2 1
Unit cell lengths118.286, 84.429, 51.049
Unit cell angles90.00, 108.98, 90.00
Refinement procedure
Resolution27.964 - 2.550
R-factor0.2177
Rwork0.211
R-free0.27360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ngd
RMSD bond length0.006
RMSD bond angle0.978
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.640
High resolution limit [Å]2.5505.4802.550
Rmerge0.0710.0490.506
Number of reflections15564
<I/σ(I)>12.2
Completeness [%]94.984.599.9
Redundancy32.73.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52930.2 M sodium formate, 0.1 M bicine, pH 8.1-8.5, 16-19% PEG5000 MME, VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon