4NF2
Crystal structure of anabolic ornithine carbamoyltransferase from Bacillus anthracis in complex with carbamoyl phosphate and L-norvaline
Experimental procedure
Experimental method | SINGLE WAVELENGT |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-06-21 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.893, 99.893, 118.989 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.230 - 1.740 |
R-factor | 0.1466 |
Rwork | 0.145 |
R-free | 0.17010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4h31 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.695 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.770 |
High resolution limit [Å] | 1.740 | 4.720 | 1.740 |
Rmerge | 0.044 | 0.027 | 0.602 |
Number of reflections | 105149 | ||
<I/σ(I)> | 12.5 | 2 | |
Completeness [%] | 99.3 | 97.7 | 99.8 |
Redundancy | 3.5 | 3.4 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | Protein: 10 mg/ml in 10 mM Tris-HCl pH 8.3, 20 mM Carbamoyl phosphate, 20 mM L-norvaline, 500 mM NaCl and 5 mM b-mercaptoethanol. Crystallization condition: Index #79 (0.1 M Bis-Tris pH 6.5, 0.2 M NH4 Acetate,25% w/v PEG 3350). Mixed as 0.2 ul + 0.2 ul., VAPOR DIFFUSION, SITTING DROP, temperature 289K |