4MZH
Crystal structure of human Spindlin1 bound to histone H3(K4me3-R8me2s) peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2012-07-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9794 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 122.985, 41.315, 50.461 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.008 - 2.204 |
R-factor | 0.2014 |
Rwork | 0.196 |
R-free | 0.24730 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.990 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.870 | 2.240 |
High resolution limit [Å] | 2.200 | 2.770 | 2.200 |
Rmerge | 0.072 | 0.144 | 0.612 |
Number of reflections | 13269 | ||
<I/σ(I)> | 21.46 | 14.11 | 2.98 |
Completeness [%] | 97.8 | 98.5 | 97.5 |
Redundancy | 4.4 | 4.4 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291.15 | 20% PEG 8000, 20% PEG 400, 0.1M MgCl2, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 291.15K |