4MLJ
dihydrodipicolinate synthase from C. jejuni, Y110F mutation with pyruvate bound to the active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-12 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9796 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 80.610, 97.240, 148.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.620 - 2.300 |
R-factor | 0.1438 |
Rwork | 0.141 |
R-free | 0.19990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ly8 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.079 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_1356) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.500 | |
High resolution limit [Å] | 1.410 | 4.220 | 1.410 |
Rmerge | 0.430 | 0.090 | 0.090 |
Number of reflections | 52574 | 8849 | 7175 |
<I/σ(I)> | 4.21 | 21.7 | 0.09 |
Completeness [%] | 79.4 | 99.9 | 20 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 288 | 18% PEG4000, 0.2 M sodium acetate, 0.1 mM TRIS, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K |