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4M6H

Structure of the reduced, metal-free form of Mycobacterium tuberculosis peptidoglycan amidase Rv3717

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyCCD
Collection date2010-11-11
DetectorADSC QUANTUM 315r
Wavelength(s)1.1159
Spacegroup nameC 1 2 1
Unit cell lengths125.358, 45.677, 67.789
Unit cell angles90.00, 116.02, 90.00
Refinement procedure
Resolution42.330 - 2.194
R-factor0.2075
Rwork0.205
R-free0.23280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ne8
RMSD bond length0.005
RMSD bond angle1.186
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.33042.3302.240
High resolution limit [Å]2.1945.9702.194
Rmerge0.0910.0260.519
Number of reflections17421
<I/σ(I)>7.5
Completeness [%]97.399.296.2
Redundancy2.32.22.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5291200 mM sodium chloride, 100 mM TRIS, 25% PEG3350, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K

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