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4LZD

Human DNA polymerase mu- Apoenzyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]93
Detector technologyCCD
Collection date2012-09-03
DetectorRIGAKU SATURN 92
Wavelength(s)1.54
Spacegroup nameP 41 21 2
Unit cell lengths124.192, 124.192, 50.407
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.856 - 1.849
Rwork0.181
R-free0.22830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2IHM (molecule B) was used as the starting molecule for molecular replacement for a lower resolution structure which was then used as the starting model for the current higher resolution structure.
RMSD bond length0.011
RMSD bond angle1.280
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8_1069)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.920
High resolution limit [Å]1.8493.9901.850
Rmerge0.0370.414
Number of reflections34121
<I/σ(I)>16.4
Completeness [%]99.399.596.4
Redundancy913.54.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8295Crystals were grown by mixing 1 uL of concentrated protein (10.7mg/mL) with 1 uL of mother liquor (50 mM imidazole pH 8, 0.8M sodium citrate) at room temperature, using the hanging drop vapor diffusion technique. The crystals reached usable size within 24 hours, and were then directly transferred to a cryoprotectant solution containing 50mM imidazole pH 8, 75mM NaCl, 1M sodium citrate, 10% glycerol., VAPOR DIFFUSION, HANGING DROP, temperature 295K

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