4LSS
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 clade A strain KER_2018_11 gp120
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2011-08-03 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.639, 65.267, 259.146 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.393 - 2.590 |
R-factor | 0.1953 |
Rwork | 0.192 |
R-free | 0.26300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.891 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (dev_998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.630 |
High resolution limit [Å] | 2.590 | 7.020 | 2.590 |
Rmerge | 0.127 | 0.044 | 0.727 |
Number of reflections | 27290 | ||
<I/σ(I)> | 5.9 | ||
Completeness [%] | 90.6 | 98.5 | 68.9 |
Redundancy | 6.8 | 7.1 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1M HEPES, 8% PEG 4000, 6.5% isopropanol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |