4LLF
Crystal structure of Cucumber Necrosis Virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | ENRAF-NONIUS FR591 |
Temperature [K] | 295 |
Detector technology | CCD |
Collection date | 2013-01-15 |
Detector | BRUKER SMART 6000 |
Wavelength(s) | 1.5418 |
Spacegroup name | I 2 3 |
Unit cell lengths | 384.000, 384.000, 384.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 75.309 - 2.889 |
R-factor | 0.2142 |
Rwork | 0.213 |
R-free | 0.24180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2tbv |
RMSD bond length | 0.011 |
RMSD bond angle | 1.491 |
Data reduction software | SAINT |
Data scaling software | SHELX |
Phasing software | PHENIX (1.8.2_1309) |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 75.309 |
High resolution limit [Å] | 2.889 |
Number of reflections | 134159 |
Completeness [%] | 64.0 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 295 | Virus concentration was adjusted to 10 mg/ml in 20 mM sodium acetate buffer at pH 5.0. The reservoir contained 0.16 M PIPES buffer and 3.2 M sodium formate, pH 6.0. Drop composed of 10 microliters reservoir and virus solutions., VAPOR DIFFUSION, HANGING DROP, temperature 295K |