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4LEJ

Crystal Structure of the Korean pine (Pinus koraiensis) vicilin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]110
Detector technologyCCD
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0
Spacegroup nameI 21 3
Unit cell lengths148.780, 148.780, 148.780
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.268 - 2.402
R-factor0.1947
Rwork0.192
R-free0.24140
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.802
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1304)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.4006.5102.400
Rmerge0.1060.1080.752
Number of reflections21280
<I/σ(I)>20
Completeness [%]98.981.5100
Redundancy7.25.57.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62982M sodium formate, 0.1 M sodium acetate trihydrate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-15

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