Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KY2

Transthyretin in complex with the fluorescent folding sensor (E)-7-hydroxy-3-(4-hydroxy-3,5-dimethylstyryl)-4-methyl-2H-chromen-2-one

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]200
Detector technologyPIXEL
Collection date2012-07-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9797
Spacegroup nameP 21 21 2
Unit cell lengths42.793, 85.646, 63.562
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.280 - 1.130
R-factor0.1616
Rwork0.161
R-free0.17430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fbr
RMSD bond length0.015
RMSD bond angle1.705
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.2801.190
High resolution limit [Å]1.1301.130
Number of reflections87639
<I/σ(I)>34.3
Completeness [%]98.590.7
Redundancy6.14.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5298The WT-TTR was concentrated to 4 mg/mL in 10 mM NaPi, 100 mM KCl, at pH 7.6 and co-crystallized at room temperature using the vapor diffusion sitting drop method. Crystals were grown from 1.395 M sodium citrate, 3.5% v/v glycerol at pH 5.5. The crystals were frozen using a cryo-protectant solution of 1.395 M sodium citrate, pH 5.5, containing 10% v/v glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon