4KTO
Crystal Structure Of a Putative Isovaleryl-CoA dehydrogenase (PSI-NYSGRC-012251) from Sinorhizobium meliloti 1021
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 31-ID |
| Synchrotron site | APS |
| Beamline | 31-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-03-18 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 0.97931 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 89.912, 115.158, 143.619 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.776 - 2.137 |
| R-factor | 0.1776 |
| Rwork | 0.175 |
| R-free | 0.22600 |
| Structure solution method | SAD |
| Starting model (for MR) | 1ivh |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.198 |
| Data reduction software | HKL-3000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHENIX (1.8.2_1309) |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.190 |
| High resolution limit [Å] | 2.137 | 5.830 | 2.150 |
| Rmerge | 0.129 | 0.060 | |
| Number of reflections | 79333 | ||
| <I/σ(I)> | 18.09 | ||
| Completeness [%] | 96.9 | 98.5 | 96.4 |
| Redundancy | 6.2 | 6.8 | 5.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | Protein (20 mM Hepes, pH 7.5, 150 mM NaCl, 10% glycerol, 5mM DTT); Reservoir (0.17M Sodium Acetate, 0.085M Tris, 25.5% PEG4000, 15% (v/v) Glycerol)pH 8.5 - MCSG1 #20); Cryoprotection (Paratone-N), Sitting Drop, Vapor Diffusion, temperature 298K, VAPOR DIFFUSION, SITTING DROP |






