4KTD
Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, GE136, from non-human primate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-06 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.920, 71.500, 154.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.816 - 2.000 |
R-factor | 0.2153 |
Rwork | 0.214 |
R-free | 0.24280 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.803 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | Auto-Rickshaw |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 38.816 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.105 | 0.057 | 0.540 |
Number of reflections | 33654 | 445 | 2470 |
<I/σ(I)> | 12.34 | 26.4 | 4.59 |
Completeness [%] | 97.6 | 98.9 | 97.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 293 | 0.1M Citric Acid, 1.6M Ammonium Sulfate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |