Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KMO

Crystal Structure of the Vps33-Vps16 HOPS subcomplex from Chaetomium thermophilum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2012-11-06
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameP 32 2 1
Unit cell lengths100.274, 100.274, 176.225
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.656 - 2.600
R-factor0.2267
Rwork0.225
R-free0.25370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4jc8
RMSD bond length0.002
RMSD bond angle0.634
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.640
High resolution limit [Å]2.6007.0502.600
Rmerge0.1110.0790.873
Number of reflections31686
<I/σ(I)>6.4
Completeness [%]98.196.594
Redundancy9.39.19.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP629812-16% (w/v) PEG 4000, 150 mM ammonium sulfate, 100 mM MES buffer , pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon