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4K24

Structure of anti-uPAR Fab ATN-658 in complex with uPAR

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2007-01-03
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.04
Spacegroup nameH 3 2
Unit cell lengths164.659, 164.659, 391.582
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution26.902 - 4.500
R-factor0.22
Rwork0.217
R-free0.27510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3BT2(chain A B U) 4K23(chain H L)
RMSD bond length0.013
RMSD bond angle2.017
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]27.00027.0004.660
High resolution limit [Å]4.5009.5604.500
Rmerge0.1390.0530.841
Number of reflections12451
<I/σ(I)>7.9
Completeness [%]99.798.3100
Redundancy4.43.74.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52950.1M HEPES pH 7.5, 55%(v/v) Tacsimate, 2%(v/v) 2-methyl-1,3-propanediol, vapor diffusion, sitting drop, temperature 295K

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