4K24
Structure of anti-uPAR Fab ATN-658 in complex with uPAR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-01-03 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.04 |
Spacegroup name | H 3 2 |
Unit cell lengths | 164.659, 164.659, 391.582 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.902 - 4.500 |
R-factor | 0.22 |
Rwork | 0.217 |
R-free | 0.27510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3BT2(chain A B U) 4K23(chain H L) |
RMSD bond length | 0.013 |
RMSD bond angle | 2.017 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.000 | 27.000 | 4.660 |
High resolution limit [Å] | 4.500 | 9.560 | 4.500 |
Rmerge | 0.139 | 0.053 | 0.841 |
Number of reflections | 12451 | ||
<I/σ(I)> | 7.9 | ||
Completeness [%] | 99.7 | 98.3 | 100 |
Redundancy | 4.4 | 3.7 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 0.1M HEPES pH 7.5, 55%(v/v) Tacsimate, 2%(v/v) 2-methyl-1,3-propanediol, vapor diffusion, sitting drop, temperature 295K |