4K1B
Structure of PIM-1 kinase bound to N-(5-(2-fluorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl)-5-((((3R,4R)-3-fluoropiperidin-4-yl)methyl)amino)pyrazolo[1,5-a]pyrimidine-3-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-09-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.977 |
Spacegroup name | P 65 |
Unit cell lengths | 97.993, 97.993, 80.542 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.996 - 2.082 |
R-factor | 0.172 |
Rwork | 0.171 |
R-free | 0.19880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.942 |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8_1068) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 80.542 | 80.542 | 2.190 |
High resolution limit [Å] | 2.082 | 6.580 | 2.082 |
Rmerge | 0.012 | 0.510 | |
Total number of observations | 6220 | 28790 | |
Number of reflections | 26448 | ||
<I/σ(I)> | 33.2 | 53.6 | 1.5 |
Completeness [%] | 100.0 | 99.2 | 100 |
Redundancy | 7.4 | 7.1 | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 289 | PEG4000, 0.2 M lithium sulfate, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K |