4JMR
A unique spumavirus gag N-terminal domain with functional properties of orthoretroviral Matrix and Capsid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-12-18 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.411, 122.365, 61.766 |
Unit cell angles | 90.00, 97.52, 90.00 |
Refinement procedure
Resolution | 45.530 - 2.900 |
R-factor | 0.2285 |
Rwork | 0.226 |
R-free | 0.27140 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.839 |
Data scaling software | XSCALE |
Phasing software | PHASER (2.3.0) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.530 | 45.500 | 3.000 |
High resolution limit [Å] | 2.900 | 10.000 | 2.900 |
Rmerge | 0.064 | 0.031 | 0.322 |
Number of reflections | 19334 | 474 | 1891 |
<I/σ(I)> | 14.55 | 29.37 | 4.28 |
Completeness [%] | 99.3 | 96.7 | 99.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 289 | 500uM 1:1 complex mixed with an equal volume 10% PEG 4000, 20% glycerol, 30mM MgCl2, 30mM CaCl2, 100mM Tris-Bicine pH 8.5, VAPOR DIFFUSION, temperature 289K |