4JCE
L54F Variant of JC Polyomavirus Major Capsid Protein VP1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-15 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 149.430, 95.710, 128.800 |
Unit cell angles | 90.00, 110.27, 90.00 |
Refinement procedure
Resolution | 44.530 - 1.900 |
R-factor | 0.15093 |
Rwork | 0.149 |
R-free | 0.18487 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nxg |
RMSD bond length | 0.009 |
RMSD bond angle | 1.415 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.000 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 132607 | |
<I/σ(I)> | 15.14 | 2.55 |
Completeness [%] | 99.3 | 96.9 |
Redundancy | 4.2 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES, 0.2 M KSCN, 12% PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |