Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4J9M

Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after an A at the primer 3' end (AA/G)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]95
Detector technologyCCD
Collection date2010-01-05
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.0
Spacegroup nameP 61
Unit cell lengths98.430, 98.430, 82.010
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.550 - 2.250
R-factor0.1834
Rwork0.180
R-free0.22260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3mr2
RMSD bond length0.005
RMSD bond angle0.917
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.0002.6002.310
High resolution limit [Å]2.2502.5202.250
Rmerge0.0980.3970.678
Number of reflections21434
<I/σ(I)>14.54.823.04
Completeness [%]99.799.999.7
Redundancy4.44.434.42
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5298PEG2K-MME, KCl, MES, pH 6.5, vapor diffusion, hanging drop, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon