4J2R
Middle domain of influenza A virus RNA-dependent polymerase PB2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-06 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | I 21 21 21 |
Unit cell lengths | 75.969, 103.511, 112.526 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.880 - 2.420 |
R-factor | 0.21828 |
Rwork | 0.215 |
R-free | 0.27110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vqz |
RMSD bond length | 0.015 |
RMSD bond angle | 1.787 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP (11.0) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.420 | 2.470 |
High resolution limit [Å] | 2.420 | 2.420 |
Rmerge | 0.045 | 0.330 |
Number of reflections | 16108 | |
<I/σ(I)> | 45 | 45.1 |
Completeness [%] | 93.5 | 98.9 |
Redundancy | 7.1 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 277 | 0.1M NaH2PO4, 0.1M KH2PO4, 0.1M MES (pH 5.9), 0.8M NaCl, 4% (v/v) 1-propanol, VAPOR DIFFUSION, HANGING DROP, temperature 277K |