4IV6
X-ray crystal structure of an isovaleryl-CoA dehydrogenase from Mycobacterium smegmatis
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.1 |
| Synchrotron site | ALS |
| Beamline | 5.0.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-10-12 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97740 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 105.820, 105.820, 169.490 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.620 - 2.000 |
| R-factor | 0.1513 |
| Rwork | 0.149 |
| R-free | 0.18480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.441 |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.050 | |
| High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
| Rmerge | 0.104 | 0.028 | 0.551 |
| Number of reflections | 64445 | 789 | 4720 |
| <I/σ(I)> | 13.73 | 38.25 | 3.31 |
| Completeness [%] | 98.1 | 89.2 | 99.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | JCSG+ well B10: 0.2 M magnesium chloride, 0.1 M sodium cacodylate, pH 6.50, 50% PEG200, 21.63 mg/mL protein, VAPOR DIFFUSION, SITTING DROP, temperature 289K |






