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4I07

Structure of mature form of cathepsin B1 from Schistosoma mansoni

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2008-07-10
DetectorADSC QUANTUM 210r
Wavelength(s)0.978
Spacegroup nameP 21 21 21
Unit cell lengths33.143, 79.173, 90.483
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.790 - 1.300
R-factor0.13936
Rwork0.137
R-free0.17667
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3qsd
RMSD bond length0.013
RMSD bond angle1.437
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.3.0037)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.320
High resolution limit [Å]1.3001.300
Rmerge0.0770.438
Number of reflections59658
<I/σ(I)>33.74
Completeness [%]89.949.3
Redundancy7.35.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6293Reservoir: 0.2M Ammonium Acetate, 0.1M Sodium Citrate, 30% PEG 4000. Protein buffer and concentration: 5mM Sodium Acetate, pH 5.5, Cpr=2.5mg/ml. Ratio Protein: Reservoir=1:1. Cryocooled in mother liquor, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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