4HM2
Naphthalene 1,2-Dioxygenase bound to ethylphenylsulfide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-11-01 |
Detector | NOIR-1 |
Wavelength(s) | 1.04 |
Spacegroup name | H 3 2 |
Unit cell lengths | 140.036, 140.036, 208.288 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.848 - 1.600 |
R-factor | 0.1451 |
Rwork | 0.143 |
R-free | 0.18600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.128 |
Data reduction software | d*TREK (9.2LDz) |
Data scaling software | d*TREK |
Phasing software | AMoRE |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.300 | 49.300 | 1.310 |
High resolution limit [Å] | 1.260 | 2.720 | 1.260 |
Rmerge | 0.064 | 0.034 | 0.503 |
Total number of observations | 78744 | 1517 | |
Number of reflections | 150873 | ||
<I/σ(I)> | 10.6 | 27.2 | 1 |
Completeness [%] | 72.5 | 97.5 | 6.8 |
Redundancy | 3.02 | 3.75 | 1.07 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 279.15 | 1.9-2.2 M AMMONIUM SULFATE, 4-6%, DIOXANE, 0.1 M MES, pH 5.0 , VAPOR DIFFUSION, temperature 279.15K |
1 | VAPOR DIFFUSION | 5 | 279.15 | 1.9-2.2 M AMMONIUM SULFATE, 4-6%, DIOXANE, 0.1 M MES, pH 5.0 , VAPOR DIFFUSION, temperature 279.15K |