Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GBY

The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to D-xylose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyCCD
Collection date2011-10-10
DetectorRAYONIX MX225HE
Wavelength(s)1.0000
Spacegroup nameP 43 21 2
Unit cell lengths95.290, 95.290, 168.181
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.714 - 2.808
R-factor0.2298
Rwork0.228
R-free0.27360
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.280
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHELXS
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.870
High resolution limit [Å]2.7702.770
Number of reflections19996
Completeness [%]98.496.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.629140 % (w/v) PEG400, 0.05 M Glycine pH 9.6 and 0.1 M LiCl, VAPOR DIFFUSION, HANGING DROP, temperature 291K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon