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4FZR

Crystal Structure of SsfS6, Streptomyces sp. SF2575 glycosyltransferase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2012-06-02
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.12715
Spacegroup nameP 61 2 2
Unit cell lengths82.605, 82.605, 230.516
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.763 - 2.397
R-factor0.226
Rwork0.224
R-free0.26170
Structure solution methodSAD
RMSD bond length0.004
RMSD bond angle0.861
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX (PHASER)
Refinement softwarePHENIX (1.8_1063)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.4006.5102.400
Rmerge0.094
Number of reflections19017
<I/σ(I)>8.7
Completeness [%]99.088.992.2
Redundancy11.58.910.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.2298Protein Solution (11.4 mg/ml SsfS6 protein, 50mM Tris pH 8.0) mixed in a 1:1 ratio with the well solution (1.13~1.40 M Sodium phosphate monobasic monohydrate / Potassium phosphate dibasic, pH 8.2) Cryoprotected with 100% Paratone-N, VAPOR DIFFUSION, SITTING DROP, temperature 298K
1VAPOR DIFFUSION, SITTING DROP8.2298Protein Solution (11.4 mg/ml SsfS6 protein, 50mM Tris pH 8.0) mixed in a 1:1 ratio with the well solution (1.13~1.40 M Sodium phosphate monobasic monohydrate / Potassium phosphate dibasic, pH 8.2) Cryoprotected with 100% Paratone-N, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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PDB entries from 2024-05-15

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