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4FJ6

Crystal structure of a glycoside hydrolase family 33, candidate sialidase (BDI_2946) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyPIXEL
Collection date2012-04-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97922,0.91837,0.97871
Spacegroup nameH 3
Unit cell lengths171.738, 171.738, 243.786
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.773 - 1.900
R-factor0.2088
Rwork0.207
R-free0.24260
Structure solution methodMAD
RMSD bond length0.007
RMSD bond angle1.531
Data reduction softwareXDS
Data scaling softwareXSCALE (December 29, 2011)
Phasing softwareSHELX
Refinement softwareREFMAC (5.6.0117)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.7731.970
High resolution limit [Å]1.9004.0801.900
Rmerge0.1050.0360.619
Rmeas0.1430.0490.850
Total number of observations741693
Number of reflections2095344094941170
<I/σ(I)>6.4417.81.4
Completeness [%]95.995.694.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP10.52770.2M lithium sulfate, 1.2M sodium dihydrogen phosphate, 0.8M di-potassium hydrogen phosphate, 0.1M Glycine pH 10.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, VAPOR DIFFUSION, SITTING DROP

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