4F5R
Open and closed ternary complex of R283K DNA polymerase beta with a dCTP analog in the same asymmetric unit
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-06-21 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.028, 79.446, 102.090 |
Unit cell angles | 90.00, 96.96, 90.00 |
Refinement procedure
Resolution | 21.360 - 2.200 |
R-factor | 0.2122 |
Rwork | 0.210 |
R-free | 0.27760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ISB and 2FMS |
RMSD bond length | 0.011 |
RMSD bond angle | 1.100 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.990 | 2.280 |
High resolution limit [Å] | 2.200 | 2.770 | 2.200 |
Rmerge | 0.136 | 0.259 | 0.703 |
Number of reflections | 263254 | ||
<I/σ(I)> | 5.67 | 2.73 | |
Completeness [%] | 99.7 | 100 | 100 |
Redundancy | 5.9 | 6 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 50mM Imidazole, 350mM Sodium Acetate, 16.5% PEG3350, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K |