4EFS
Human MMP12 in complex with L-glutamate motif inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.918400 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 68.970, 63.190, 37.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.590 - 1.630 |
R-factor | 0.15554 |
Rwork | 0.154 |
R-free | 0.19044 |
Structure solution method | RIGID BODY |
Starting model (for MR) | 3lik |
RMSD bond length | 0.029 |
RMSD bond angle | 2.607 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.5.0109) |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.590 | 46.590 | 1.720 |
High resolution limit [Å] | 1.630 | 4.860 | 1.630 |
Rmerge | 0.086 | 0.037 | 0.726 |
Number of reflections | 20710 | ||
<I/σ(I)> | 18.72 | 48.38 | 3.31 |
Completeness [%] | 97.4 | 99.7 | 99.3 |
Redundancy | 8.72 | 7.49 | 8.55 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Protein solution - 0.53 mM F67D mutant of human MMP12 residues 106-263 in 0.1 M acetohydroxamic acid 0.003 M CaCl2, 0.200 M NaCl 0.02 M Tris-HCl, pH 7.5. Reservoir solution -27% PEG 10K,0.2 M imidazole malate cryoconditions - CryoProtX-Cryomix 7, 25% MPEG 5K, 0.1 M AAB 10/90, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K |