Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DLC

Crystal Structure of Trypanosoma brucei dUTPase with dUMP, MgF3- transition state analogue, and Mg2+

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2011-07-11
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.976
Spacegroup nameP 43 21 2
Unit cell lengths68.280, 68.280, 123.660
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.280 - 1.759
R-factor0.1668
Rwork0.165
R-free0.19400
Structure solution methodREFINED 4DKB
Starting model (for MR)4dkb
RMSD bond length0.015
RMSD bond angle1.410
Data scaling softwareSCALA (3.3.16)
Phasing softwareREFMAC (5.5.0109)
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.28145.8321.800
High resolution limit [Å]1.7597.8701.759
Rmerge0.0730.0330.781
Total number of observations433026360
Number of reflections29775
<I/σ(I)>2218.21
Completeness [%]99.897.699.8
Redundancy12.710.812.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52900.2 M sodium/potassium tartrate, 0.1 M Bis-Tris propane, pH 8.5, 20% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 290K

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon