4DKB
Crystal Structure of Trypanosoma brucei dUTPase with dUpNp and Ca2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-12 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.976 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 68.470, 68.470, 123.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.416 - 1.831 |
R-factor | 0.1702 |
Rwork | 0.169 |
R-free | 0.19780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dk4 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.440 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.416 | 48.416 | 1.930 |
High resolution limit [Å] | 1.831 | 5.790 | 1.831 |
Rmerge | 0.110 | 0.038 | 0.584 |
Total number of observations | 12243 | 50150 | |
Number of reflections | 26775 | ||
<I/σ(I)> | 18.5 | 14.5 | 1.3 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 13.7 | 12.4 | 13.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 290 | 20% w/v PEG3350, 0.2 M ammonium citrate tribasic, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K |