4DJA
Crystal structure of a prokaryotic (6-4) photolyase PhrB from Agrobacterium Tumefaciens with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore at 1.45A resolution
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-02-23 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.91841 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 98.388, 106.786, 55.913 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 19.950 - 1.450 |
| R-factor | 0.13995 |
| Rwork | 0.138 |
| R-free | 0.18049 |
| Structure solution method | SAD/MOLECULAR REPLACEMENT |
| Starting model (for MR) | UNPUBLISHED STRUCTURAL DATA OF FE-EDGE SAD-PHASING (WAVELENGTH:1.741) - 2ND CRYSTAL |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.517 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | SHELXCD |
| Refinement software | REFMAC (5.6.0117/PHENIX) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 72.360 | 1.530 |
| High resolution limit [Å] | 1.450 | 1.450 |
| Rmerge | 0.037 | 0.377 |
| Number of reflections | 104964 | |
| <I/σ(I)> | 22 | 2.7 |
| Completeness [%] | 95.6 | 78 |
| Redundancy | 4.4 | 3.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 100 mM MES, 4% PEG400, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |






