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4D6G

Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the blood group A-trisaccharide (L19 mutant)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI
Synchrotron siteCLSI
Beamline08B1-1
Temperature [K]100
Spacegroup nameC 2 2 21
Unit cell lengths92.250, 154.020, 96.660
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.330 - 1.240
R-factor0.11764
Rwork0.117
R-free0.13274
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wmi
RMSD bond length0.011
RMSD bond angle1.446
Data reduction softwareMOSFLM
Data scaling softwareAimless
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1301.310
High resolution limit [Å]1.2401.240
Rmerge0.0400.310
Number of reflections192579
<I/σ(I)>20.64.7
Completeness [%]99.698
Redundancy4.53.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
115% PEG 3350, 0.2M AMMONIUM SULFATE, 0.1M SODIUM ACETATE PH 4.8

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PDB entries from 2024-05-15

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