4BC2
Crystal structure of human D-xylulokinase in complex with D-xylulose and adenosine diphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-22 |
Detector | ADSC QUANTUM 315r |
Spacegroup name | P 32 |
Unit cell lengths | 102.160, 102.160, 159.390 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.820 - 1.970 |
R-factor | 0.1744 |
Rwork | 0.173 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | HUMAN D-XYLULOSE DETERMINED BY TWO-ENERGY SELENIUM MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.050 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.800 | 2.000 |
High resolution limit [Å] | 1.970 | 1.970 |
Rmerge | 0.140 | |
Number of reflections | 131532 | |
<I/σ(I)> | 9.8 | 0.5 |
Completeness [%] | 100.0 | 99.8 |
Redundancy | 5.7 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 200 MM MES/KOH PH 5.9, 15% (W/V) PEG 6000 |