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4B5V

Crystal structures of divalent metal dependent pyruvate aldolase, HpaI, in complex with 4-hydroxyl-2-ketoheptane-1,7-dioate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Spacegroup nameP 21 3
Unit cell lengths151.740, 151.740, 151.740
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.935 - 2.041
R-factor0.1557
Rwork0.153
R-free0.17920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2v5j
RMSD bond length0.004
RMSD bond angle0.868
Phasing softwarePHENIX
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.9002.090
High resolution limit [Å]2.0402.040
Rmerge0.0300.290
Number of reflections72826
<I/σ(I)>18.52
Completeness [%]98.580.9
Redundancy19.44.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
10.5 M AMMONIUM DIHYDROGEN PHOSPHATE, 30% GLYCEROL, 2 MM COCL2 PH 5

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PDB entries from 2024-05-15

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