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4AH6

Human mitochondrial aspartyl-tRNA synthetase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2010-08-21
DetectorDECTRIS PILATUS 6M
Spacegroup nameP 1 2 1
Unit cell lengths142.400, 82.600, 146.300
Unit cell angles90.00, 100.40, 90.00
Refinement procedure
Resolution29.916 - 3.700
R-factor0.2222
Rwork0.219
R-free0.28010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)HOMOLOGY MODEL BASED ON PDB ENTRY 1C0A
RMSD bond length0.005
RMSD bond angle1.084
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]89.0003.800
High resolution limit [Å]3.7003.700
Rmerge0.1800.640
Number of reflections35768
<I/σ(I)>9.42.1
Completeness [%]98.891.2
Redundancy7.24
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5SITTING DROPLETS WERE PREPARED BY MIXING 0.5 UL HSADRS2 AT 10.6 MG/ML (IN 50 MM HEPES-NA PH 7.5, 150 MM NACL, 0.1 MM EDTA, 10% (V/V) GLYCEROL AND 1 MM DTT) WITH 0.5 UL BOTTOM PHASE OF A BIPHASIC MIXTURE OF 50 MM BIS-TRIS PH 5.5, 20% (M/V) PEG-3350 AND 1 M AMMONIUM SULFATE AND EQUILIBRATED BY VAPOR DIFFUSION OVER 50 UL OF THE LATTER SOLUTION.

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