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439D

5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 5.2R
Synchrotron siteELETTRA
Beamline5.2R
Temperature [K]170
Detector technologyIMAGE PLATE
Collection date1998-04-04
DetectorMARRESEARCH
Spacegroup nameH 3 2
Unit cell lengths41.969, 41.969, 127.137
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution15.000 - 1.600
R-factor0.183

*

Rwork0.224
R-free0.24100

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RMSD bond length0.023
RMSD bond angle1.400

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.630
High resolution limit [Å]1.6001.600
Rmerge0.0660.291

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Total number of observations43171

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Number of reflections5994
Completeness [%]96.199.7
Redundancy4.33.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropRNA0.25 (mM)
21dropspermine tetrahydrochloride12 (mM)
31drop80 (mM)
41drop20 (mM)
51dropsodium cacodylate40 (mM)
61dropMPD10 (%(v/v))
71reservoirMPD40 (%)

229380

PDB entries from 2024-12-25

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