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438D

STRUCTURE OF AN RNA DUPLEX R(GGGCGCUCC)2 WITH NON-ADJACENT G.U BASE PAIRS

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IIC
Spacegroup nameH 3
Unit cell lengths45.680, 45.680, 59.950
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution10.000 - 2.500
R-factor0.196

*

Rwork0.186
R-free0.24000
RMSD bond length0.010

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RMSD bond angle1.400

*

Refinement softwareX-PLOR (3.1)
Data quality characteristics
 Overall
Low resolution limit [Å]10.000
High resolution limit [Å]2.500
Rmerge0.043
Number of reflections1403
Completeness [%]83.8
Redundancy37
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropRNA1 (mM)single strand
21dropsodium cacodylate25 (mM)
31drop1 (mM)
41dropspermine tetrachloride0.5 (mM)
51reservoirMPD40 (%)

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PDB entries from 2024-05-15

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