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3ZF0

Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81A mutant with dUpNHpp).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 21 3
Unit cell lengths87.120, 87.120, 87.120
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.300 - 2.900
R-factor0.24255
Rwork0.242
R-free0.27463
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.996
Data reduction softwareXDS
Data scaling softwareXDS
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.3003.060
High resolution limit [Å]2.9002.900
Rmerge0.0700.350
Number of reflections5103
<I/σ(I)>17.62.1
Completeness [%]99.9100
Redundancy7.58.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
12-8% TERT-BUTANOL, 0.1M TRIS (PH 8.5), 30-50% MPD OR PEG400.

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PDB entries from 2024-07-24

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