3ZDX
Integrin alphaIIB beta3 headpiece and RGD peptide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID |
Synchrotron site | APS |
Beamline | 23-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 259.710, 144.960, 104.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.361 - 2.450 |
R-factor | 0.163 |
Rwork | 0.163 |
R-free | 0.19710 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3t3p |
RMSD bond length | 0.007 |
RMSD bond angle | 0.658 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.580 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.150 | 0.810 |
Number of reflections | 145557 | |
<I/σ(I)> | 10.2 | 2.8 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8.9 | 11% PEG 8000, 0.2 M AMMONIUM SULFATE, 0.1 M TRIS-HCL, PH 8.9 |