3WSI
EDTA-treated, reduced HcgD from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.710 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 95.210, 135.830, 161.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.926 - 2.300 |
R-factor | 0.1811 |
Rwork | 0.179 |
R-free | 0.22040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fyw |
RMSD bond length | 0.009 |
RMSD bond angle | 1.159 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.420 | |
High resolution limit [Å] | 2.300 | 12.000 | 2.300 |
Rmerge | 0.066 | 0.023 | 0.506 |
Rmeas | 0.027 | 0.614 | |
Number of reflections | 92234 | 704 | 12927 |
<I/σ(I)> | 11.74 | 37.12 | 2.52 |
Completeness [%] | 98.5 | 91.7 | 98.8 |
Redundancy | 3.19 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 298 | 10%(w/v) PEG8000, 0.2M NaCl, 0.1M Na/K phosphate, 5mM sodium dithionite, pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 298K |