3WSH
EDTA-treated, oxidized HcgD from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-12-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 63 |
Unit cell lengths | 157.370, 157.370, 258.150 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.198 - 2.800 |
R-factor | 0.1786 |
Rwork | 0.176 |
R-free | 0.21800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fyw |
RMSD bond length | 0.006 |
RMSD bond angle | 1.088 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 | |
High resolution limit [Å] | 2.800 | 12.000 | 2.800 |
Rmerge | 0.114 | 0.043 | 0.679 |
Rmeas | 0.047 | 0.732 | |
Number of reflections | 87810 | 1100 | 8804 |
<I/σ(I)> | 13.99 | 35.46 | 4.37 |
Completeness [%] | 98.9 | 94.9 | 99.8 |
Redundancy | 6.89 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 2.4M Ammonium sulfate, 0.1M HEPES-NaOH, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |